Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKLYYLRELRGKAARIKEIRR
5GAH Chain:Q ((2-112))-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKE---


General information:
TITO was launched using:
RESULT:

Template: 5GAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Q - contact count / total energy / energy per contact / energy per residue : 414 -33010 -79.73 -297.38
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain Q : 0.83

3D Compatibility (PKB) : -79.73
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_5GAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAH-query.scw
PDB file : Tito_Scwrl_5GAH.pdb: