Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIKGINHLLFSVSHLDTSIDFYQKVFGAKLLVKGRTTAYFDMNGIWLALNEEPDIPRNDIKLSYTHIAFTIEDHEFEEMSAKLKRLHVNILPGRERDERDRKSIYFTDPDGHKFEFHTGTLQDRLRYYKQEKTHMHFYDETAF
4NB1 Chain:A ((9-145))--LKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEE--------HFSYTHIAFTIDDSEFKYWHQRLKDNNVNILE---------QSIYFTDPDGHKLELHTGTLENRLNY---AKPHMTFY-----


General information:
TITO was launched using:
RESULT:

Template: 4NB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 413 -61447 -148.78 -525.18
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -148.78
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_4NB1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NB1-query.scw
PDB file : Tito_Scwrl_4NB1.pdb: