Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFEWNKYFPFHNQFSKEALKKADPKEVETYVNRVMESVFGSDYAAQFPFRDPLPQKEHPAKPDAKPDVKPDIDIFETADHVFVKVPISEEWLEQVRIKHTSHELWLENLPR-------------------ADHPKKVNLPCLVKRKGTKAVYKDGLLEVMFQKQQDYN-MSEVEIIR
3W1Z Chain:A ((34-143))------------------------------------------------------------------ELSPSIDVHEGKDTVSVDVELPGVKKEDVQVHYDSGKLTISGEVVNERKNESTEGNQRWSERRFGSFSRTITIPAKIDADRIEANFSNGLLTVTLPKVEKSQTKKQIAIK-


General information:
TITO was launched using:
RESULT:

Template: 3W1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 259 -14792 -57.11 -164.35
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -57.11
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3W1Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W1Z-query.scw
PDB file : Tito_Scwrl_3W1Z.pdb: