Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------MEKLFKEVKLEELENQKGSGLGKAQCAALWLQCASGGTIGCGGGAVACQNYRQFCR-------------------------------------------------
1DDT Chain:? ((200-380))SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALEHPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADN------LEKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNSYNRPAY


General information:
TITO was launched using:
RESULT:

Template: 1DDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 42 -1429 -34.02 -28.58
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -34.02
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.215

(partial model without unconserved sides chains):
PDB file : Tito_1DDT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DDT-query.scw
PDB file : Tito_Scwrl_1DDT.pdb: