Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESKVVENRLKEAKLIAVIRSKDKQEACQQIESLLDKGIRAVEVTYTTPGASDIIESF-RNREDILIGAGTVISAQQAGEAAKAGAQFIVSPGFSADLAEHLSFVKTHYIPGVLTPSEIMEALTFGFTTLKLFPSGVF-GIPFMKNLAGPFPQVTFIPTGGIHPSEVPDWLRAGAGAVGVGSQLGSCSKEDLQAVFQV
1FWR Chain:A ((27-173))------------------------EHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFQFFPAEANGGVKALQAIAGPFSQVRFCPKGGISPANYRDYL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1FWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -30622 -48.61 -211.18
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -48.61
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_1FWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FWR-query.scw
PDB file : Tito_Scwrl_1FWR.pdb: