Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIKEHLKQLKPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLAL--YPDGYSAALRTRLSKHLNV-SETSLIFGNGSDEIIQIICRAFLNDKTNTVTAAPTFPQYKHNAVIEGAEVREIALRPDGSHDLDAMLEAIDE-QTQVVWICSPNNPTGTYTSEGELLAFLERVPS---RVLVVLDEAYYEYVTAEDYPETVPLLSKYSNLMILRTFSKAYGLAALRVGYGIADENLIRQIEPAREPFNTSRLGQAAAIAALDDQAFIASCVEQNNAGLQQYYDFAKTH-GLKCYPSQTNFVLIDFKRPADELFQALLEKGYIVRSGNALG--FPTSLRITIGTKEQNEEILAILAEIL
3EUC Chain:A ((26-365))---------------------VPDSHGL---VKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESWMSR---LTDFGNLLVMRTVSK-LGLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVPDAA-QTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAASL


General information:
TITO was launched using:
RESULT:

Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1722 -5324 -3.09 -16.13
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -3.09
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_3EUC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EUC-query.scw
PDB file : Tito_Scwrl_3EUC.pdb: