Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMILQPFVLGEWKKHGLGTVISIILIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFEYNELNSEKLARALGMHRE
2YOM Chain:A ((120-142))----SRQVELERELAELRARPKPDERA-------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 6 1053 175.50 45.78
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : 175.50
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.846

(partial model without unconserved sides chains):
PDB file : Tito_2YOM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YOM-query.scw
PDB file : Tito_Scwrl_2YOM.pdb: