Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFQLDLIKDKVEFFEAASLQELEKKINTQIENNKAIMLRVKSVSHQTLVAEGRILYSAVVHFSAEA
2GND Chain:A ((23-58))---------------------------DAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHL----


General information:
TITO was launched using:
RESULT:

Template: 2GND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 59 1181 20.01 32.79
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 20.01
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.132

(partial model without unconserved sides chains):
PDB file : Tito_2GND.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GND-query.scw
PDB file : Tito_Scwrl_2GND.pdb: