Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSL-KLKNLKNLLPEKRFTFIKENLLTADLAS---LLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQG--KVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPDMAFHRLIKQ----HLQQKPLTIFGDGQQSRDFTYISDCVK-GITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISG-----RKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLYQGE
3RUH Chain:A ((29-338))---LITGVAGFIGSNLLEKLLKLNQV-VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI--RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNAT-NITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIG-NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHI-----KYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGL--------------


General information:
TITO was launched using:
RESULT:

Template: 3RUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1659 -25790 -15.55 -89.24
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -15.55
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3RUH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RUH-query.scw
PDB file : Tito_Scwrl_3RUH.pdb: