Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYP--EKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVE-KQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYF-VDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENLHASKVNVLTPFVPAELIGE-DKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLFENK
3CTY Chain:A ((14-307))----ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILD--KAVAGGLTAEAPLVENYL----GFKSIVGSELAKLFADHAANYAK---IREGVEVRSIKKTQGGFDIETNDDTYHAKYVIITTGT---THKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTS--GNFAQIASAVGDGCKA--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1700 47429 27.90 164.68
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 27.90
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_3CTY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CTY-query.scw
PDB file : Tito_Scwrl_3CTY.pdb: