Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVYAVNMGIVFIWSWFAKMCGGRDDSLATGYRPNKLLIWIPLASLVLVSGLRYRVGTDFQTYTLLYELAGDYQNVWQIFGFGTAKTATDPGFTALLWLMNFITEDPQIMYFTVAVVTYSFIMKTLADYGRPFELSVFLFLGTFHYYASFNGIRQYMVAAVLFWAIRYIISGNWKRYFLIVLVSSLFHSSALIMIPVYFIVRRKAWSPAIFGLSALFLGMTFLYQKFISVFVVVLENSSYSHYEKWLMTNTNGMNVIKIAVLVLPLFLAFCYKERLRSLWPQIDIVVNLCLLGFLFGLLATKDVIFARFNIYFGLYQMILVPYFVRIFDEKSNALIYIAIVVCYFLYSYLLMPVDSSVLPYRTIFSR
1T5Q Chain:A ((1-30))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YAEGTFISDYSIAMDKIHQQDFVNWLLAQK--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1T5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 9 -571 -63.39 -19.02
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.36

3D Compatibility (PKB) : -63.39
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.36
QMean score : 0.307

(partial model without unconserved sides chains):
PDB file : Tito_1T5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T5Q-query.scw
PDB file : Tito_Scwrl_1T5Q.pdb: