Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNIKKFAKQATVLTFTTALLAGGATQAFAKETNQKPYKETYGISHITRHDMLQIPEQ--QKNEKYQVPEFDSSTIKNISSAKGLD----------VWDSWPLQNAD-GTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATFTSDGKIRLFYT--DFSGKHYGKQTLTTAQV--NVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKST-----SFFRQESQKLLQSDKKRTAELANGALGMIELNDDY---TLKKVMKPLIASNTVTDEIERANVFKMNGKWYLFTDSRGSK-------MTIDGITSNDIYMLGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVP-QAKGNNVVITSYMTNRGFYADK--QSTFAPSFLLNIKGKKTSVVKDSILEQGQLTVNK 2YFR Chain:A ((69-516)) -------------------------------------KEAKSGTQLTYNDFKKIAKTLIEQDARYAIPFFNASKIKNMPAAKTLDAQSGKVEDLEIWDSWPVQDAKTGYVSNWNGYQLVIGMMGVP-NVNDNHIYLLYNKYGDNDFNHWKNAGPIF----------GLGTPVIQQWSGSATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETN--KGADNIAMRDAHVIDDDNGNRYLVFEASTGTEN-YQGDDQIYQWLNYGGTNKDNLGDFF----QILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYSPLISAPMVSDEIERPDVVKLGNKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSDNLTHGYVPLNESGVVLTASVPANWRTATYSYYAVPVEGRDDQLLITSYITNRGEVAGKGMHATWAPSFLLQINPDNTTTVLAKMTNQG------

General information: TITO was launched using: RESULT: Template: 2YFR.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2496 94481 37.85 229.32 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain A : 0.81 3D Compatibility (PKB) : 37.85 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.81 QMean score : 0.477

(partial model without unconserved sides chains): PDB file : Tito_2YFR.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YFR-query.scw PDB file : Tito_Scwrl_2YFR.pdb: