Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MPSITKQIMSGAKWTSIST-MCITIIQIVQ------FALLGNMMTLTEFGLVGMITTVTVFAQ--------IVLD-MGFGAALIQRDDATERQLSTLYWLNIMTGVLLFVLLYVSSPV--IAGFYQREELVFLVRILAIMFLIAPIGQQYQYMLQKQLHFNTLSKIEIFSNVLSFGYLAIAVFMMDAILAYVISQVLLQSSKG-ILYWAVYRKKWHPAFVFDLRGMKDFFSFGAFQLSSRLVNRLG-ANIDMILIGRFIGAEALGIYN-LAYQIVTIPVLKINPIVTRVAFPIFAKNKYENSVIREGFLNMTKMLALVSFPLLIGLVSVSDAFITAVFGEKWLAAVPILNVLAIVGILRVLMNPNGSVLLAKGRADLAFYWDSGVLLLYGLSLFAAVQTGSLLTVAWVYAIISVVNFLIGRWLLAYVIKLNLSAYFQSIMKPFLITAAMGIIAFGVSLSTEHFSMQAEMRLAISVAAGALCYLFLLVKAYPQTKSKLLRKGRLS
4YHC Chain:A ((2-468))GWSDHDELSTDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLSKEQMPRTLKAIALDPQGNYVSLFSKD--------TLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELVVVESSGEIQVFSLTIEIEGADIALVEKFQ-------LSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGPVWSPKI----------LSQNKNYLTETKKDIYGIAMADILFLARDSGVDMIDLKNDELLHSFTLPPIKVNTFSVGVSNSRFVNGQFRVSSISFCFTH-----------------AVTEKVLYYYYGNESNESYIILNKWDQQPNLVDVHDPDNS-LASLTFDELQ-------------ENIHEVEDASESVMSSD-----------GLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCVAIVLGNYVALVGYGSEIFR-----


General information:
TITO was launched using:
RESULT:

Template: 4YHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2225 -121136 -54.44 -294.73
target 2D structure prediction score : 0.21
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -54.44
2D Compatibility (Sec. Struct. Predict.) : 0.21
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.128

(partial model without unconserved sides chains):
PDB file : Tito_4YHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YHC-query.scw
PDB file : Tito_Scwrl_4YHC.pdb: