Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
5DM6 Chain:A ((20-95)) | -------------------------------------------------------------------------------------------------------------------------------DFSGLAKKRPEKALTEALPKTGGRNNRGRITSRFIGG----GHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17535 for 347 contacts (50.5/contact) +
2D Compatibility (PS) -8012 + (NN) -6400 + (LL) 9356
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: 9779.0 ( 28.18 by residue)
QMean score : 0.321
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