Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDANPAFDTVHPSGHILVRSCRGGYMHSVSLSEAAMETDAETL----AEAILLTA-------DVSCLKALLEVRNEIVAAGHTPSAQVPTTDDLNVAIEKLLAHQLRRRNR
3IWP Chain:A ((77-164))
-------------PVFVMIRPRGGDFLYSDR-EIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVH---DPMAALETLLTL-------
General information:
TITO was launched using:
RESULT:
Template:
3IWP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29150 for 479 contacts (-60.9/contact) +
2D Compatibility (PS) -8468 + (NN) -6106 + (LL) 1276
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -48048.0 ( -100.31 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_3IWP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IWP-query.scw
PDB file :
Tito_Scwrl_3IWP.pdb
: