Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAALLSPAIAWQQISACTDRTLTITCEDSEVISYQDLIARAAACIPPLRRLDLKRGEPVLITAHTNLEFLSCFLGLMLHGAVPVPIPPREALKTTERFMTRLGPLLRHHRVLICTPAEHDEIRAAASTDCQISRFTALAEAGDEQFGRATAQQLADTATADWPLCTLDDDAYVQYTSGSTAAPRGVVITYRNLLSNMRAMAVGSQFQHGDVMGSWLPLHHDMGLVGSLFA--ALFNSVSAVFTTPHRFLYDPLGFLRLLTSSGATHTFMPNFALEWLINAYHRRGADIEGIDLHKMRRLIIASEPVHAEGMRRFAATFAGVGLAPTALGSGYGLAEATVAVSMSAPNTGFRTETHAAAEVVTGGRVLPGYEVRI------DAAPGARAGTIKLRGDSVAAKAYVGGKKLDALDEEGFCDTHDLGFLVDDEIVILGRQDEVFIVHGENRFPY----DIEFIIRGESEQHRTKVACFGVNERVVVVLESPLDSIIDKAEADRLRCQVVAATGLQLDELITVRRGAIPTTTSGKLKRRAVAQAYRDGTLPRLATHAWTADPDSAPKTTRSSLEGAH |
| 3VNS Chain:A ((41-445)) | -----------FREVAATAPERTALSAEDDR-ISYGRLDAWSDAVARTLLAEGVRPGDRVALRMSPGAEAIVAILAILKCGAAYVPVDLRNPVSRSDFILADSG-----ASALIGEPHEGCAV-------TRVVRTAAVAECKDAEP-----A----------PGPGAEDMAYVIYTSG-TGNPKGVPVRHANVLALLAGAPSVFDFSGDD---RWL-LFHSLSFDFSVWEIWGAFSTGAELVVLPHWAARTPEQYLAVIIDRGVTVINQTPTAFLALTEAAVRGGRDVSG-----LRYVIFGGEKLTAPMLRPWAKAF---GLDRPRLVNGYGITETTVFTTFEE-----ITEAYLAQDASIIGRALPSFGTRVVGDDGRDVAPG-ETGELWLSGAQL-AEGYLRRPELTA---EKFPEV-----------VRYYRTGDLVSELPDGRFAYEGRADLQIKLRG-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278316 for 3241 contacts (-85.9/contact) +
2D Compatibility (PS) -40903 + (NN) -14431 + (LL) 12700
1D Compatibility (HY) -14800 + (ID) 5500
Total energy: -341250.0 ( -105.29 by residue)
QMean score : 0.428
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