Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MPRVEVGLVIHSRMHARA----PVDVWRSVRS-----LPDFW-----RLLQVRVASQFGDGLFQAG-------LAGALLFNPDRAADPMAIAGAFAVLFL-PYSLLGPFAGALMDRWDRRWV----------------LVGANTGRLALIAGVGT---------ILAVGAGDVPLLVGALVANGLA----------------RFVASGLSAALPHVVPREQVVTMNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWS-LRFGPR-------VLGPDDTERAIHGSAVYAVVTGWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTAL-LFFAATGLGAFLANVLTPT-------AIRRWGRYATANG--ALAAAATIQVAAAGLLVPVMV-VCGFLLGVAGQ---------VVKLCAD----------------------SAMQMDV------DDALRGHVFAVQDALFWVSYILSITVAAALIPEHGHAPVFVLF-------GSAIYLAGLVVHTIVGRRGQPVIGR------------------------ |
| 3U1K Chain:A ((4-627)) | MASAVAVDLGNRKLEISSGKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLTSDKEILTSRIIDRSIRPLFPAGYFYDTQVLCNLLAVDGVNEPDVLAINGASVALSLSDIPWNGPVGAVRIGIIDGEYVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQDFCHAIKVGVKYTQQIIQGIQQLVKETGVTKRTPQKLFTPSPEIVKYTHKLAMERLYAVFTDYEHDKVSRDEAVNKIRLDTEEQLKEKFPEADPYEIIESFNVVAKEVFRSIVLNEYKRCDGRDLTSLRNVSCEVDMFKTLHGSALFQR--GQTQ-VLCTVTFDSLESGIKSDQVITAINGIKDKNFMLHYE-FPPYATNEIGKVTGLNRRELGHGALAEKALYPVIPRDFPFTIRVTSEVLESNGSSSMASACGGSLALMDSGVPISSAVAGVAIGLVTKTDPEKGEIEDYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASRKENGPVVETVQVPLSKRAKFVGPGGYNLKKLQAETGVTISQVDEETFSVFAPTPSAMHEARDFITE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -341879 for 3217 contacts (-106.3/contact) +
2D Compatibility (PS) -46022 + (NN) -10099 + (LL) 116
1D Compatibility (HY) -6000 + (ID) 4050
Total energy: -407934.0 ( -126.81 by residue)
QMean score : 0.202
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