Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYTLRRRSLLAEVYSGRTGVSEVCDANPYLLRAAKFHGKPSRVICPICRKEQLTLVSWVFGEHLGAVSGSARTAEELILLATRFSEFAVHVVEVCRTCSWNHLVKSYVLGAARPARPPRGSGGTRTARNGARTASE |
2GAG Chain:D ((4-19)) | -------------------------------------------IDCPNCGPRNENEFKY------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6082 for 54 contacts (-112.6/contact) +
2D Compatibility (PS) -1419 + (NN) 670 + (LL) 7664
1D Compatibility (HY) -400 + (ID) 150
Total energy: 283.0 ( 5.24 by residue)
QMean score : 0.107
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