Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIDISAGTIHYEATGPETGRPVVFVHGYMMGGQLWRRVSERLAGRGLRCIAPTWPLGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDTG-GVVTQLVAVHYPERLGALVLTSCDAFEHFPPPILKPVIL-------AAKSATLFRAAIQVMRAPAARNRAYAGLSH--HNIDH-----LTRAWVRPALSNPAIAEDLRQLSLSLRTEVTTAVAARLPEFDKPALIAWSADDVFFALENGQR-LAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT |
| 4IVJ Chain:A ((15-255)) | ----------LYYEDHG--TGTPVVLIHGFPLSGHSWERQSAALLDAGYRVI--TYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLAS----------LEPFLLKTDDNPDGAAPQEFFDGIVAAVKAD--RYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAP--TTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170158 for 1839 contacts (-92.5/contact) +
2D Compatibility (PS) -23824 + (NN) -8701 + (LL) 3036
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -217447.0 ( -118.24 by residue)
QMean score : 0.400
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