Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGID-DLRPALIRLDRQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
2YWQ Chain:A ((10-95)) | ----------------------------NLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAG----KARAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFR------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14562 for 523 contacts (27.8/contact) +
2D Compatibility (PS) -8187 + (NN) 308 + (LL) 10484
1D Compatibility (HY) 4400 + (ID) 200
Total energy: 21367.0 ( 40.85 by residue)
QMean score : 0.093
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