Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPARSVPRPRWVAPVRRVGRLAVWDRPERRSGIPALDGLRAIAVALVLASHGGIPGMGGGFIGVDAFFVLSGFLITSLLLDELGRTGRIDLSGFWIRRARRLLPALVLMVLTVSAARALFPDQALTGLRSDAIAAFLWTANWRFVAQNTDYFTQGAPPSPLQHTWSLGVEEQYYVVWPLLLIGATLLLAARARRRCRRATVGGVRFAAFLIASLGTMASATAAVAFTSAATRDRIYFGTDTRAQALLIGSAAAALLVRDWPSLNRGWCLIRTRWGRRIARLLPFVGLAGLAVTTHVATGSVGEFRHGLLIVVAGAAVIVVASVAMEQRGAVARILAWRPLVWLGTISYGVYLWHWPIFLALNGQRTGWSGPALFAARCAATVVLAGASWWLIEQPIRRWRPARVPLLPLAAATVASAAAVTMLVVPVGAGPGLREIGLPPGVSAVAAVSPSPPEASQPAPGPRDPNRPFTVSVFGDSIGWTLMHYLPPTPGFRFIDHTVIGCSLVRGTPYRYIGQTLEQRAECDGWPARWSAQVN-RDQPDVALLIVGRWETVDRVNEGRWTHIGDPTFDAYLNAELQRALSIVGST--GVRVMVTTVPYSRGGEKPDGRLYPEDQPERVNKWNAMLHNAISQHSNVGMIDLNKKLCPDGVYTAKVDGIKVRSDGVHLTQEGVKWLIPWLEDSVRVAS |
4C1B Chain:A ((133-301)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAMDVAIIGDSIVRHVRAASS--KGNKVRTFCFPGARVKNI-------------------STQIPTILGAAESPGAVVLHVGTNDTGLR-------------QSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRR--GN------ERFSRLLALNEWLITWCKE-QKLLFANNWNLFWERP--------RLFRPDGLHPSRAGAELLSDNISRLLRT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53372 for 1036 contacts (-51.5/contact) +
2D Compatibility (PS) -18548 + (NN) -10600 + (LL) 37628
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -50642.0 ( -48.88 by residue)
QMean score : 0.388
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