Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQREIYDGEARLSW--------VLAALAGILGATAFTHSAGYFVTFMTGN-SQRAVLGLFGDDAWMSVTASLLILFFVAGVVIASVCRRHFWAAHPHGPTVLTTFSLIFAAG----VDIMLGGWHESMLDFVPILFVVFGIGALNTSFVKDGEVSVPLSYVTGTLVKMGQGIERHLAGGKVEDWLGYFLLHASFVLGAAAGGAISMVVTGPQML------------------------AVAAVVCAATTG----YTYLHADRRGLVNQKRPQPGKRLFRALRR---------GELDSGTSTPATNYGSS------ |
| 5C4I Chain:C ((1-312)) | MLDRIASIKKAPDEEYYVPGHRTCAGCGPALTYRLVAKAAGPNTIFIGPTGCMYVANTSYGCGPW---RVPWIHAQITNGGAVASGIEAAYKAMIRKKKTDAEFPNIIVMAGDGGAVDIGLQALSAMLYRGHDVLFICYDNESYANTGIQTSPTTPYGANTTFTPPGEVVPEGKKLFPKDNPKVIAHGHPELKYVATASIGWPVDLMNKVRKGLNQEGPAYIHIHAPCPKGWQFPADKTIEMAKLAVQTGMFQLYEYENGEYKLSVKVDKRKPVSEYMKLQKRFAHLKPEHIAKMQAFVDARCAEVGITVPVVAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165552 for 1914 contacts (-86.5/contact) +
2D Compatibility (PS) -26445 + (NN) -183 + (LL) 372
1D Compatibility (HY) -800 + (ID) 1950
Total energy: -194558.0 ( -101.65 by residue)
QMean score : 0.147
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