Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVRRRAGERLPTVWDFETDPQYQSKLDWVEKFMAEELEPLDLVALDPYDKKNADTMAILRPLQRQVKDQGLWAAHLRPELGGQGFGQVKLALLNEIIGRSRWAPSAFGC-------QAPDSGNAEILALFGTDEQKARYLRPLLDGEITSCYSMTEPQGGSDPGLFVTAATRDAAGNGDWIINGEKWFSTNAKHASFFIVMAVTKPE--ARTYEKMSLFIVPADTPGIEIVR---NVGVGAESTRHASHGYIRYHDVRVPADHVLGGEGQAFMIAQTRLGGGRIHHAMRTIALARRAFDMMCERALSRQTRHGRLADLQMTQEKIADSWIQIEQFRLLVLRTAWLID---KHHDYQKVRRDIAAVKVAMPQVLHDVVQRAMHLHGALGVSDEMPFVKMMLAAESLGIADGATELHKMTVARRTLREYQPVTTLFPSQHIPTRRAHAEAWLAQRLEHAIAEF |
3MDD Chain:A ((2-385)) | --------------FSFELTEQQKEFQATARKFAREEIIP---VAAE-YDRTGEYPV----PLLKRAWELGLMNTHIPESFGGLGLGIIDSCLITEEL--------AYGCTGVQTAIEANTLGQVPLI-IGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKG---DEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDTRG-----IVFEDVRVPKENVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMKVELARLSYQRAAWEIDSGRRNTYYASIAKAYAA------DIANQLATDAVQVFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRIIIAREHIGRYK--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175833 for 3190 contacts (-55.1/contact) +
2D Compatibility (PS) -40911 + (NN) -27314 + (LL) 5788
1D Compatibility (HY) -19600 + (ID) 6000
Total energy: -263870.0 ( -82.72 by residue)
QMean score : 0.432
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