Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRFGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVL-VKMVASALTIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGR-TAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDY-----RNLLPGFIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLW-FVVIGLIAAAVGYLYARVFHASVAITRRLPGGPVLK-----PAIGGLLVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGELTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRTNVTIYETQRLNRQTAEAERGGSDRPTTA |
| 4KJP Chain:A ((90-437)) | -----------------------------------------------------------------------------------------------------------------AMFGYFLVRKYAPEAGGSGIPE-IEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIE-EMRPQFRYTLISIKAVFIGVIMSTIMYRI------FNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGL-CGLLGFVAPATSGGGFNLIPIA----TAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTA-FGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIIT-GLGATLLAQ----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -252256 for 3083 contacts (-81.8/contact) +
2D Compatibility (PS) -35024 + (NN) -13304 + (LL) 8944
1D Compatibility (HY) -31600 + (ID) 5350
Total energy: -328590.0 ( -106.58 by residue)
QMean score : 0.315
|
|
|