Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSSAGTAW--ARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVDAGVRQVVILAAGLDARAYRLNWPAGTVVYEIDQPSVLEYKAGILQSHGAVPTARRHAVAVDLRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTMNTK-GNTQRWNRMR---ERLGLDIDVQALTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
| 2UYO Chain:A ((14-290)) | --------------------------VGTTAVMVAAARAAETDRPDALIRDPYAKLLVTNTGAGALWEAM----------DAEAAAMVEHMRSYQAVRTNFFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDA--------ELIYHDENRAVVADWLNRHGWRATAQSAPDEMRRVGRWGD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132767 for 1909 contacts (-69.5/contact) +
2D Compatibility (PS) -27123 + (NN) -12788 + (LL) 4236
1D Compatibility (HY) -18400 + (ID) 6400
Total energy: -193242.0 ( -101.23 by residue)
QMean score : 0.481
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