Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
2PN6 Chain:A ((1-45))
--------------------MDEIDLRILKILQY---NAKYSLDEIAREIRIPKATLSYRIKKLEKDG----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18763 for 247 contacts (-76.0/contact) +
2D Compatibility (PS) -5029 + (NN) -2199 + (LL) 5012
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -23629.0 ( -95.66 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_2PN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PN6-query.scw
PDB file :
Tito_Scwrl_2PN6.pdb
: