Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADP----FSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQAR------------------VLGYVFNPLSI--------FWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQL-AGYYLIRAPRPD----RELDVTVTLHRDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQ--GIRLWLRRVPVVPR---- |
| 1QEX Chain:A ((1-288)) | MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSITEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMFGQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMR---VGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115159 for 1348 contacts (-85.4/contact) +
2D Compatibility (PS) -22379 + (NN) 879 + (LL) 48
1D Compatibility (HY) -1200 + (ID) 1300
Total energy: -139111.0 ( -103.20 by residue)
QMean score : 0.092
|
|
|