Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGG--PLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
3GW8 Chain:A ((11-231))
-----KLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPI-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97557 for 1782 contacts (-54.7/contact) +
2D Compatibility (PS) -23997 + (NN) -16802 + (LL) 1184
1D Compatibility (HY) -20000 + (ID) 6300
Total energy: -163472.0 ( -91.74 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3GW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GW8-query.scw
PDB file :
Tito_Scwrl_3GW8.pdb
: