Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------------------------MGSVIKKRRKRMSKKKHRKLLRRTRVQRRKLGK-----------------------
4CT0 Chain:B ((10-105))
AGLEVLFQGPDSMYVLQDPIWLLMANTDDSIMMTYQLPSRDLQAVLKEDQEKLKLLQRSQP-RFTEGQRRELREVHPWVHTGGLPTAIDVTGCVYCE
General information:
TITO was launched using:
RESULT:
Template:
4CT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8569 for 119 contacts (72.0/contact) +
2D Compatibility (PS) -3430 + (NN) -2797 + (LL) 176
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 918.0 ( 7.71 by residue)
QMean score : 0.769
(partial model without unconserved sides chains):
PDB file :
Tito_4CT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CT0-query.scw
PDB file :
Tito_Scwrl_4CT0.pdb
: