Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDA-E-RFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHA-DQADAARAAYRTYGKGRHRAGL-NYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
4CHG Chain:A ((2-123))
MIVDTSVWIAYLSTSESLASRWLADRIAADSTVIVPEVVMMELLIGKTDED---TAALRRRLLQ--RFAIEPLAPVRDAEDAAAIHRRCRRGGD--TVRSLIDCQVAAMALRIGVAVAHRDRDYEAIRT------
General information:
TITO was launched using:
RESULT:
Template:
4CHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50250 for 863 contacts (-58.2/contact) +
2D Compatibility (PS) -12952 + (NN) -5874 + (LL) 848
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -74078.0 ( -85.84 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_4CHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CHG-query.scw
PDB file :
Tito_Scwrl_4CHG.pdb
: