Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQTTQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFP-SSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGNQE
1OHP Chain:A ((12-116))
-------------QRYVAALNAGDLDGIVALFADDATVENPVG---SEPR----SGTAAIREFYANSL---KLPLAVELTQEVRAVANEAAFAFIVSFEYQGRKTV-VAPIDHFRFNGAGKVVSMRALF-----------
General information:
TITO was launched using:
RESULT:
Template:
1OHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56612 for 680 contacts (-83.3/contact) +
2D Compatibility (PS) -10954 + (NN) -2377 + (LL) 2040
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -76653.0 ( -112.73 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1OHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OHP-query.scw
PDB file :
Tito_Scwrl_1OHP.pdb
: