Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRT--DLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNN--NWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVK--NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 1RHS Chain:A ((42-278)) | ----------------------------EARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP-SRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRA----QGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHIALAAY-LCGKPDVAIYDGSWFEW------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -50037 for 1761 contacts (-28.4/contact) +
2D Compatibility (PS) -24837 + (NN) -14967 + (LL) 3200
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -104591.0 ( -59.39 by residue)
QMean score : 0.438
|
|
|