Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTGSVTVRV--PGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLEL-VGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV |
2V8P Chain:A ((2-267)) | ----SHMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREG-VLRVETNIG-----IPQEE-NLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFV--TPEYAEEK--IQRIISGEVEEIENVLGD----IARELYPEINEVYRF-VEYLGFKPFVSGSGSTVYFFG-GASEELKKAAKMRGWKVV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161778 for 2199 contacts (-73.6/contact) +
2D Compatibility (PS) -29728 + (NN) -19758 + (LL) 1704
1D Compatibility (HY) -20400 + (ID) 4250
Total energy: -234210.0 ( -106.51 by residue)
QMean score : 0.412
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