Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
3H2C Chain:A ((37-293)) | --------------------------------------NEKTLIMGILN---------GSYNEVDAAVRHA-KEMRDEGAHIIDIG-ESTR-----SVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150726 for 2011 contacts (-75.0/contact) +
2D Compatibility (PS) -26672 + (NN) -13932 + (LL) 1924
1D Compatibility (HY) -20400 + (ID) 4200
Total energy: -214006.0 ( -106.42 by residue)
QMean score : 0.494
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