Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSADLTAHARIREAAIEQFGRHGFG-VGLRAIAEAAGVSAALVIHHFGSKEGLRKACDDFVAEEIRSSKAAALKSNDPTTWLAQMAEIESYAPLMAYLVRSMQSGGELAKMLWQKMIDNAEEYLDEGVRAGTVKPSRDPRARARFLAITGGGGFLLYLQMHENPTDLRAALRDYAHDMVLPSLEVYTEGLLADRAMYEAFLAEAQQGEAHVG
1ZKG Chain:A ((14-85))
-----LSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFENFLMKN----------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZKG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38318 for 460 contacts (-83.3/contact) +
2D Compatibility (PS) -8342 + (NN) -5724 + (LL) 10720
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -47264.0 ( -102.75 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_1ZKG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZKG-query.scw
PDB file :
Tito_Scwrl_1ZKG.pdb
: