Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGEL--EMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGG-GDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQGLA--RTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFE--VAESRIVWSGGSYVRRPLSVPFRVTS |
2Y98 Chain:A ((43-414)) | -----------------------YGELQETEPVSRVRPPYGEEA--WLVTRYEDVRAVLGDGR-FVRGPSMTRDEPRTRPEMV----KGGLLSMDPPEHSRLRRLVVKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQ--EAAEQAYAYMGDLIDRRRKEPTDDLVSALVQAR--DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195752 for 2939 contacts (-66.6/contact) +
2D Compatibility (PS) -38899 + (NN) -17012 + (LL) 2352
1D Compatibility (HY) -22800 + (ID) 6850
Total energy: -278961.0 ( -94.92 by residue)
QMean score : 0.462
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