Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWRYPLSTRLALPNTPGVASFAMTSSPSTVSTTLLSILRDDLNIDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEELLTCDTVGELEAAIAAKYRDE
2LL8 Chain:A ((1-59))
----------------------MTSTFDRVAT----IIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2LL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33722 for 352 contacts (-95.8/contact) +
2D Compatibility (PS) -5919 + (NN) 233 + (LL) 3596
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -42012.0 ( -119.35 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_2LL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LL8-query.scw
PDB file :
Tito_Scwrl_2LL8.pdb
: