Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAGSDLDDFRGLLAKAFDERVVAWTAEAEAQERFPRQLIEHLGVCGVFDAKWATDARPDVG-------KLVE-LAFALGQLASAGIGVGVSLHDS-AIAILRRFGKSDYLRDICDQAIRGAAVLCIGASEESGGSDLQIVETEIRSRDGGFEVRGVKKFVSLSPIADHIMVVARS-VDHDPTSRHGNVAVVAV--PAAQVSVQTPYRKVGAGPLDTAAVCI-DTWVPADALVARAGTGLAAISWGLAHERMSIAGQIAASCQRAIGITLARMMSRRQFGQTLFEHQALRLRMADLQARVDLLRYALHGIAE---QGRLELRTAAAVKVTAARLGEEVISECMHIFGGAGYLVDETTLGKWWRDMKLARVGGGTDEVLWELVAAGMTPDHDGYAAVVGASKA |
| 1WS9 Chain:A ((39-380)) | ----------------------------------FPWDLVRKLAEFGVFGA-LVPEAYGGAGLSTRLFARMVEAIAYYDGALA-----LTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKD-YPVERYWRDARLTRIGEGTSEILKLVIA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236420 for 2902 contacts (-81.5/contact) +
2D Compatibility (PS) -36108 + (NN) -19298 + (LL) 3748
1D Compatibility (HY) -14000 + (ID) 4750
Total energy: -306828.0 ( -105.73 by residue)
QMean score : 0.468
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