Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIP-GLS-LKTLSGDLT--TNPTAATGNVKLTLGGSDIDADFVVF-----DGILYATLT-PNQWSDFGPAADIYDPA-QVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRG-SGNSVQMTLSKWGEK-VQVTKPPVS |
| 3BK5 Chain:A ((3-198)) | -------------------------------------AEKGLEIAQERKARDEGWGDSIATMEMILKNAQ-ESSTRLMRLKSLEVEGDGD-KGLTIFDQPRDVTGTAFLNHSHTIGADDQWLYLPALKRVKRISSRNKSGPFMGSEFAYEDLSSFEI-EKYRFNHLKDEKFNGQDVFVLEQIPTDK----------NSGYTKQVVWLDKAH-YRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2773 for 1228 contacts (-2.3/contact) +
2D Compatibility (PS) -19160 + (NN) -4268 + (LL) 2560
1D Compatibility (HY) 400 + (ID) 650
Total energy: -23891.0 ( -19.46 by residue)
QMean score : 0.167
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