Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDGGQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV
2EXD Chain:A ((81-140))
-------------------------------------------------------------------------------GKYTFELKGKVGKVVKIAE-DHYLVEVEGDKWIAYSDE---KLSLGDRVMVVDVDGLKLKVKRI-
General information:
TITO was launched using:
RESULT:
Template:
2EXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16868 for 379 contacts (-44.5/contact) +
2D Compatibility (PS) -6558 + (NN) 901 + (LL) 8060
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -16515.0 ( -43.58 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2EXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EXD-query.scw
PDB file :
Tito_Scwrl_2EXD.pdb
: