Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSE-I--WRGVTSEGAEARWYSEAQEVS-DDS-PALAQPAVPNYRGS-CWIPFSIELEGDA-ASFVGEIGKILADSVEQLQAAAFVNGSGNG----EPT--GFVSALTGTSDQVVV--------GAGSEAIVAADVYALQSALPPRFQ--ASAAFAANLSTINTLRQAETS-NGALKF-PSLHDS-PPMLAGKSVLEVSHMDTVDSAV-----------------------TATNHPLVLGDWKQFLIGDRVGSMVELVPHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
| 3J7W Chain:A ((21-344)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGDKLALFLKVFGGEVL-TAFARTSVTTSRHMVRSISSGKSAQFPVLGR-TQ-AAYLAPGENLDDKRKDIKHTEKVITIDGLLTADVLIYDIEDAMNHYDVRSEYTSQLGESLAMAADGAVLAEIAGLCNVESKYNENI-EGLGTATVIETTQNKAALTDQVALGKEIIAALTKARAALTKNYVPAADRVFYCDPDSYSAILAALMPNAANYAALIDPEKGSIRNVMGFEVVEVPHLTAGGAGTAREGTTGQKHVFPANKGEGNVKVAKDNVIGLFMHRSAVGTVKLRDLALERARR--A----NFQADQIIAKYAMGHGGLRPEAAGAVVFKV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67796 for 1745 contacts (-38.9/contact) +
2D Compatibility (PS) -29064 + (NN) -3562 + (LL) 13036
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -91586.0 ( -52.48 by residue)
QMean score : 0.162
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