Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDSCYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRNAQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR
2FEO Chain:A ((5-223))
-----APVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPG-LIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNMAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQK-----
General information:
TITO was launched using:
RESULT:
Template:
2FEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123749 for 1767 contacts (-70.0/contact) +
2D Compatibility (PS) -23405 + (NN) -11240 + (LL) 912
1D Compatibility (HY) -18000 + (ID) 4350
Total energy: -179832.0 ( -101.77 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2FEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEO-query.scw
PDB file :
Tito_Scwrl_2FEO.pdb
: