Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFDTERVSRAVAAALV---GPGGVALVVKV------FAGL-PG-VIHTPARRGFFRSNPERIQIGDWRYEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVSRYGATVIPNINAAIEVLGTGTDYRF
1IS8 Chain:A ((162-220))
-----QERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRG-KMNSKTVTSTMLGVFREDPKT---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9144 for 245 contacts (-37.3/contact) +
2D Compatibility (PS) -5582 + (NN) -6509 + (LL) 6288
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -18047.0 ( -73.66 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_1IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IS8-query.scw
PDB file :
Tito_Scwrl_1IS8.pdb
: