Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRELVTTAAITGAAIGGAPVAGADPQRYDGDVPGMNYDASLGAPCSSWERFIFGRGPSGQAEACHFPPPNQFPP-AETGYWVISYPLYGVQQVGAPCPKPQAAAQSPDGLPMLCLGARGWQPGWFTGAGFFPPEP |
2VG2 Chain:A ((6-45)) | -------------------------------------------------------------------PAPDDYPTFPDTSTWPVVFPELPAAPYGGPCRPPQHTSKA----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9795 for 174 contacts (56.3/contact) +
2D Compatibility (PS) -4184 + (NN) -8590 + (LL) 3044
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -1685.0 ( -9.68 by residue)
QMean score : 0.376
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