Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLSRTSTGRVILVPTQLRFDRWFLPLAVPLGLGPKNSELWVGAGSLHVKMGWAFAADIPLTSITKAEATNARVYAAGVHFGFGRWLVNGSRKGLVALTIDPPEQAKMWKKSMTVRELWVSVTDPDALVTACTAK
4L0G Chain:A ((274-358))
-------------------FDKYF----KPLGCQDKNAAGGTGYDSAHYLLSWYYAWGGALDG-----AWSWKIGSSHVHFGYQNPMAAWALANDSDMKPKSPNGASDWAKSL----------------------
General information:
TITO was launched using:
RESULT:
Template:
4L0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10670 for 486 contacts (-22.0/contact) +
2D Compatibility (PS) -8847 + (NN) -2432 + (LL) 4568
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -20581.0 ( -42.35 by residue)
QMean score : 0.012
(partial model without unconserved sides chains):
PDB file :
Tito_4L0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L0G-query.scw
PDB file :
Tito_Scwrl_4L0G.pdb
: