Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
| 3GP4 Chain:A ((2-73)) | --------------SLNIKEASEKSGVSADTIRYYERIG----------LIPPIHRN----ESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFR------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36146 for 478 contacts (-75.6/contact) +
2D Compatibility (PS) -7813 + (NN) -1362 + (LL) 9280
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -39441.0 ( -82.51 by residue)
QMean score : 0.256
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