Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRDAAEIYRRSFAVIRAEADLARFPADVARVVVRLIHTCGQVDVAEHVAYTDDVVARAGAALAAGAPVLCDSSMVAAGITTSRLPADNQIVSLVADPRATELAARRQTTRSAAGVELCAERLPGAVLAIGNAPTALFRLLELVDEGAPPPAAVLGGPVGFVGSAQAKEELIERPRGMSYLVVRGRRGGSAMAAAAVNAIASDRE
1F2V Chain:A ((4-207))
-YDYIRDGNAIYERSFAIIRAEADLSRFSEEEADLAVRMVHACGSVEATRQFVFSPDFVSSARAALKAGAPILCDAEMVAHGVTRARLPAGNEVICTLRDPRTPALAAEIGNTRSAAALKLWSERLAGSVVAIGNAPTALFFLLEMLRDGAPKPAAILGMPVGFVGAAESKDALAENSYGVPFAIVRGRLGGSAMTAAALNSLAR---
General information:
TITO was launched using:
RESULT:
Template:
1F2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160225 for 1814 contacts (-88.3/contact) +
2D Compatibility (PS) -22936 + (NN) -16929 + (LL) 336
1D Compatibility (HY) -20800 + (ID) 5600
Total energy: -226154.0 ( -124.67 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_1F2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F2V-query.scw
PDB file :
Tito_Scwrl_1F2V.pdb
: