Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIGDGANGGPGQPGGPGGLLYGNGGHGGAGAAGQDRGAGNSAGLIGNGGAGGAGGNGGIGGAGAPGGLGGDGGKGGFADEFTGGFAQGGRGGFGGNGNTGASGGMGGAGGAGGAGGAGGLLIGDGGAGGAGGIGGAGGVGGGGGAGGTGGGGVASAFGGGNAFGGRGGDGGDGGDGGTGGAGGARG-AGGAGGAGGWLSGHSGAHGAMGSGGEGGAGGGGGARGEAGAGGGTSTGTNPGKAGAPGTQGDSGDPGPPG |
2LO9 Chain:A ((1-24)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGERCCKNGKRGCGRWCRDHSRCC---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1414 for 134 contacts (10.6/contact) +
2D Compatibility (PS) -2881 + (NN) -1957 + (LL) -13536
1D Compatibility (HY) -800 + (ID) 400
Total energy: -18160.0 ( -135.52 by residue)
QMean score : -0.195
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