Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 4N03 Chain:A ((214-356)) | ----------------------QVAALAKEKVDAILLSAGPQQAASLAGIARSQGMKQPILGSNSAYSPQLLATPAKPALVEGFFI----ATAGAPMSADL-PAIKKLAEAYSKKYPKDPLDSGVVNG--------YGGASIVVSALEKACANKDL-TREGL------------INAHRSEANADDGLGTP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26246 for 946 contacts (-27.7/contact) +
2D Compatibility (PS) -14189 + (NN) 2876 + (LL) 20472
1D Compatibility (HY) -2400 + (ID) 1900
Total energy: -21387.0 ( -22.61 by residue)
QMean score : -0.115
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