Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMV--------GGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQSQPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI
3P47 Chain:A ((104-268))
---TLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTV---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120165 for 1260 contacts (-95.4/contact) +
2D Compatibility (PS) -17096 + (NN) -7478 + (LL) 2736
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -159853.0 ( -126.87 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_3P47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P47-query.scw
PDB file :
Tito_Scwrl_3P47.pdb
: